Science software for Linux

open source middleware system for volunteer and grid computing

SPSS Statistics is a statistical software suite developed by IBM for data management, advanced analytics, multivariate analysis, business intelligence, and criminal investigation. Long produced by SPSS Inc., it was acquired by IBM in 2009. Versions of the software released since 2015 have the brand name IBM SPSS Statistics.

Folding@home (FAH or F@h) is a distributed computing project aimed to help scientists develop new therapeutics for a variety of diseases by the means of simulating protein dynamics. This includes the process of protein folding and the movements of proteins, and is reliant on simulations run on volunteers' personal computers. Folding@home is currently based at the University of Pennsylvania and led by Greg Bowman, a former student of Vijay Pande.

statistical software

RStudio IDE (or RStudio) is an integrated development environment for R, a programming language for statistical computing and graphics. It's available in two formats: RStudio Desktop is a regular desktop application while RStudio Server runs on a remote server and allows accessing RStudio using a web browser. The RStudio IDE is a product of Posit PBC (formerly RStudio PBC, formerly RStudio Inc.).

thumb|A BFG Technologies|BFG Physx card PhysX is an open-source realtime physics engine middleware SDK developed by Nvidia as part of the Nvidia GameWorks software suite.

AnyLogic is a multimethod simulation modeling tool developed by The AnyLogic Company (formerly XJ Technologies). It supports agent-based, discrete event, and system dynamics simulation methodologies. AnyLogic is cross-platform simulation software that works on Windows, macOS and Linux. AnyLogic is used to simulate: markets and competition, healthcare, manufacturing, supply chains and logistics, retail, business processes, social and ecosystem dynamics, defense, project and asset management, pedestrian dynamics and road traffic, IT, and aerospace. It is considered to be among the major players

Stata (, , alternatively , occasionally stylized as STATA) is a general-purpose statistical software package developed by StataCorp for data manipulation, visualization, statistics, and automated reporting. It is used by researchers in many fields, including biomedicine, economics, epidemiology, and sociology.

Bioconductor is a free, open source and open development software project for the analysis and comprehension of genomic data generated by wet lab experiments in molecular biology.

alt=LabPlot interface with column data and sparklines.|thumb|LabPlot can draw sparklines at top of the data columns to show a quick glance of the data before plotting them. LabPlot is a free and open-source, cross-platform computer program for interactive scientific plotting, curve fitting, nonlinear regression, data processing and data analysis. LabPlot is available, under the GPL-2.0-or-later license, for Windows, macOS, Linux, FreeBSD and Haiku operating systems.

Prime95, also distributed as the command-line utility mprime for FreeBSD, Linux, and MacOS is a freeware application written by George Woltman. It is the official client of the Great Internet Mersenne Prime Search (GIMPS), a volunteer computing project dedicated to searching for Mersenne primes. It is also used in overclocking to test for system stability.

CP2K is a freely available (GPL) quantum chemistry and solid state physics program package, written in Fortran 2008, to perform atomistic simulations of solid state, liquid, molecular, periodic, material, crystal, and biological systems. It provides a general framework for different methods: density functional theory (DFT) using a mixed Gaussian and plane waves approach (GPW) via LDA, GGA, MP2, or RPA levels of theory, classical pair and many-body potentials, semi-empirical (AM1, PM3, MNDO, MNDOd, PM6) and tight-binding Hamiltonians, as well as Quantum Mechanics/Molecular Mechanics (QM/MM) hyb

image analysis and scientific visualization software

FLUKA (an acronym for Fluktuierende Kaskade) is a fully integrated Monte Carlo simulation package for the interaction and transport of particles and nuclei in matter. FLUKA has many applications in particle physics, high energy experimental physics and engineering, shielding, detector and telescope design, cosmic ray studies, dosimetry, medical physics, radiobiology. A recent line of development concerns hadron therapy. As of 2022 FLUKA allowed simulation of interactions of photons with energy 100 eV and above.

KAlgebra is a mathematical graph calculator included in the KDE education package. While it is based on the MathML content markup language, knowledge of MathML is not required for use. The calculator includes numerical, logical, symbolic, and analytical functions, and can plot the results onto a 2D or 3D graph. KAlgebra is free and open source software, licensed under the GPL-2.0-or-later license.

HNSKY or Hallo Northern Sky is a free and open-source planetarium program for Linux, macOS, Microsoft Windows, and Raspberry Pi to simulate the night sky. It is provided with several non-English language modules, numerous astronomical catalogues, conversion utilities and tools, as well as several stellar databases.

open-source astronomy visualisation program

X-13ARIMA-SEATS, successor to X-12-ARIMA and X-11, is a set of statistical methods for seasonal adjustment and other descriptive analysis of time series data that are implemented in the U.S. Census Bureau's software package. These methods are or have been used by Statistics Canada, Australian Bureau of Statistics, and the statistical offices of many other countries.