Cytoscape
Sign in to saveCytoscape is an open source bioinformatics software platform for visualizing molecular interaction networks and integrating with gene expression profiles and other state data. Additional features are available as plugins. Plugins are available for network and molecular profiling analyses, new layouts, additional file format support and connection with databases and searching in large networks. Plugins may be developed using the Cytoscape open Java software architecture by anyone and plugin community development is encouraged. Cytoscape also has a JavaScript-centric sister project named Cytosca
Key facts
- Software.name
- Cytoscape
- Software.screenshot
- CytoscapeHome.png
- Software.screenshot size
- 200px
- Software.caption
- Cytoscape home page
- Software.author
- Institute for Systems Biology
- Software.developer
- Cytoscape Team
- Software.released
- July 2002
- Software.latest release version
- 3.10.3
- Software.programming language
- Java
- Software.operating system
- Any (Java-based)
- Software.genre
- Image processing
- Software.license
- LGPL
via Wikipedia infobox
Article
6 sectionsContents
- History
- Development
- Usage
- See also
- References
- External links
Cytoscape is an open source bioinformatics software platform for visualizing molecular interaction networks and integrating with gene expression profiles and other state data. Additional features are available as plugins. Plugins are available for network and molecular profiling analyses, new layouts, additional file format support and connection with databases and searching in large networks. Plugins may be developed using the Cytoscape open Java software architecture by anyone and plugin community development is encouraged. Cytoscape also has a JavaScript-centric sister project named Cytoscape.js that can be used to analyse and visualise graphs in JavaScript environments, like a browser.
== History == Cytoscape was originally created at the Institute of Systems Biology in Seattle in 2002. Now, it is developed by an international consortium of open source developers. Cytoscape was initially made public in July, 2002 (v0.8); the second release (v0.9) was in November, 2002, and v1.0 was released in March 2003. Version 1.1.1 is the last stable release for the 1.0 series. Version 2.0 was initially released in 2004; Cytoscape 2.83, the final 2.xx version, was released in May 2012. Version 3.0 was released Feb 1, 2013, and the latest version, 3.4.0, was released in May 2016.