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GeneQ18041055· pop 5· linked from 7 articles

Also known as DDX29, DEAH-box helicase 29, DExH-box helicase 29

DExH-box helicase 29 (DHX29) is a 155 kDa protein that in humans is encoded by the DHX29 gene.

Gene data

DHX29
Name
DExH-box helicase 29
Type
protein-coding
Position
55,256,055–55,307,722 (−)
Aliases
DDX29
RefSeq RNA
NM_001345964.2, NM_001345965.2, NM_019030.4, NR_144323.2, NR_144324.2
RefSeq protein
NP_001332893.1, NP_001332894.1, NP_061903.2

This gene encodes a member of the DEAH (Asp-Glu-Ala-His) subfamily of proteins, part of the DEAD (Asp-Glu-Ala-Asp) box family of RNA helicases. The encoded protein functions in translation initiation, and is specifically required for ribosomal scanning across stable mRNA secondary structures during initiation codon selection. This protein may also play a role in sensing virally derived cytosolic nucleic acids. Knockdown of this gene results in reduced protein translation and impaired proliferation of cancer cells. [provided by RefSeq, Sep 2016].

via MyGene.info

Gene · Ensembl

DExH-box helicase 29

Symbol
DHX29
Biotype
Protein coding
Organism
Homo sapiens
Location
5:55,256,055-55,307,722
Strand
Reverse (−)
Assembly
GRCh38
View on Ensembl →

via Ensembl · EMBL-EBI

Described at

A Hidden Layer in Your DNA Is Running Your Body

More than 60 years after its discovery, scientists are still learning surprising ways DNA stores and translates instructions for life.

popularmechanics.com

Gear-obsessed editors choose every product we review. We may earn commission if you buy from a link. Why Trust Us? When you drill down far enough, life becomes an alphabet soup of letters—four of them to be exact. These nucleotides—adenine (A), cytosine (C), guanine (G), and thymine (T)—form codons that are read in three-letter groups that usually tell cells which amino acid to add to the mix when building a protein. Of the 64 possible combinations of codons, 61 of them code for amino acids , while three (UAA, UAG, UGA) serve as stop signals that represent the end of protein synthesis. But in some cases, multiple codons actually code for the same amino acid—they’re known as “synonymous codons”—and as you might guess from their name, they were long thought to be interchangeable. However, in recent years, that idea has changed . Scientists have discovered that some synonymous codons are more effective than others at helping messenger RNA (mRNA) remain stable and translate efficiently. For example, if mRNA contains many non-optimal synonymous codons, it translates less efficiently. Scientists didn’t know the hidden mechanism for how cells determine this outcome until now. “These findings reveal a direct molecular link between synonymous codon choice and the control of gene expression in human cells,” Masanori Yoshinaga, a co-author of the study from Kyoto University, said in a press statement. Of course, the question remained: How was the DHX29 protein regulating this process? To find the answer, Yoshinaga and his team turned to cryo-electron microscopy. This technique, also known as cryo-EM , flash-freezes samples and then probes them with electron beams, creating 3D-images of DNA, RNA, proteins, viruses, and cells . It’s an especially effective way to capture how such microscopic structures interact with each other. And in the case of DHX29, it revealed how the protein interacts with 80S ribosomes—the cellular machines responsible for protein synthesis in human cells. “We have long been fascinated by how cells interpret the hidden layer of information embedded within the genetic code,” Osamu Takeuchi, senior author of the study from Kyoto University, said in a press statement, “so discovering the molecular factor that allows human cells to read and respond to this hidden code has been particularly rewarding.” Considering that DHX29 plays a role in cell differentiation and cancer development, revealing this hidden layer of human DNA has profound consequences for understanding these processes. Although the four-nucleotide building blocks of life may seem simple, scientists continue to learn that they’re really anything but. Darren lives in Portland, has a cat, and writes/edits about sci-fi and how our world works. You can find his previous stuff at Gizmodo and Paste if you look hard enough.

Excerpt from a page describing this subject · 14,340 chars · not written by Vinony

Wikidata facts

Show 6 more facts
HomoloGene ID
10387
genomic end
55307694
genomic start
55256055
cytogenetic location
5q11.2
Sources (3)

via Wikidata · CC0

~1 min read

Article

5 sections
Contents
  • Function
  • Interactions
  • See also
  • References
  • Further reading

DExH-box helicase 29 (DHX29) is a 155 kDa protein that in humans is encoded by the DHX29 gene.

== Function ==

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via Wikidata sitelinks · CC0

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