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EntityQ2458963· pop 7· linked from 161 articles

Also known as Assisted Model Building with Energy Refinement

thumb|right|AMBER is used to minimize the bond stretching energy of this ethane molecule.

~10 min read

Encyclopedic overview

11 sections
Contents
  • Force field
  • Functional form
  • Parameter sets
  • Unofficial variants
  • Software
  • Programs
  • AmberTools
  • Additional tools
  • See also
  • References
  • External links

thumb|right|AMBER is used to minimize the bond stretching energy of this ethane molecule.

Assisted Model Building with Energy Refinement (AMBER) is the name of a widely used molecular dynamics software package originally developed by Peter Kollman's group at the University of California, San Francisco. It has also, subsequently, come to designate a family of force fields for molecular dynamics of biomolecules that can be used both within the AMBER software suite and with many modern computational platforms.

Excerpted from Wikipedia’s “AMBER” article, available under the CC BY-SA 4.0 licence.

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